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E-GEOD-73335 - Discovery of progenitor signatures by time series synexpression analysis during Drosophila cell immortalization [Microarray Expression]

Status
Released on 23 September 2015, last updated on 26 September 2015
Organism
Drosophila melanogaster
Samples (18)
Array (1)
Protocols (7)
Description
To characterize the sequence of events associated with RasV12 immortalization of Drosophila embryonic cells, we generated transcriptional time series during cell line establishment, from primary cultures until passage (P) 19. We generated two transcriptional time series from two cell lines (R3 and R7) by sampling the cultures at successive stages, early (P2-4), intermediate (P4-11), and late (P16-19), characterized by different passage times. Time points for the R3 time-series were: P2, P2 (replicate), P5, P6, P7, P8, P16, P17 and P19; for the R7 time-series: P2, P2 (replicate), P3, P4, P7, P8, P16, P17 and P19.
Experiment type
transcription profiling by array 
Contacts
Mary-Lee Dequeant <mdequeant@genetics.med.harvard.edu>, Amanda Simcox, Delphine Fagegaltier, Gregory J Hannon, Kerstin Spirohn, Mary-Lee Dequéant, Norbert Perrimon, Yanhui Hu
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-73335.idf.txt
Sample and data relationshipE-GEOD-73335.sdrf.txt
Raw data (1)E-GEOD-73335.raw.1.zip
Processed data (1)E-GEOD-73335.processed.1.zip
Array designA-AFFY-35.adf.txt
Links