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E-GEOD-72001 - RNA-seq following enhancer repression

Status
Released on 26 October 2015, last updated on 8 December 2015
Organism
Homo sapiens
Samples (8)
Protocols (4)
Description
Using RNA-seq to identify genes regulated by dCas9-KRAB mediated enhancer repression in NCI-H2009 lung adenocarcinoma cells NCI-H2009 cells were first transfected with dCas9-KRAB fusion and subsequently transfected with no guide RNA (Empty), a guide RNA that has no target in the human genome (Dummy), and two separate guide RNAs (e3 #1 and e3 #2) recognizing the enhancer region of our study.
Experiment type
RNA-seq of coding RNA 
Contacts
MINSEQE
Exp. designProtocolsVariablesProcessedSeq. reads
Files
Investigation descriptionE-GEOD-72001.idf.txt
Sample and data relationshipE-GEOD-72001.sdrf.txt
Additional data (1)E-GEOD-72001.additional.1.zip
Links