Please note that we have stopped the regular imports of Gene Expression Omnibus (GEO) data into ArrayExpress. This may not be the latest version of this experiment.

E-GEOD-67672 - RNA-seq analysis between mouse UPS tumors (KP) and mouse UPS tumors without HIF-2alpha (KPH2)

Status
Released on 31 December 2015, last updated on 1 January 2016
Organism
Mus musculus
Samples (8)
Protocols (1)
Description
Purpose: determine RNA expression differences in an unbiased fashion between UPS tumors derived from LSL-KrasG12D;Trp53-/- (KP) mice, and UPS tumors derived from LSL-KrasG12D;Trp53-/-;Epas1-/- (KPH2) mice. Epas1 encodes HIF-2alpha protein. RNA-seq was performed on KP (n = 4) and KPH2 (n = 4) derived UPS tumors using Illumina HiSeq 2000.
Experiment type
RNA-seq of coding RNA 
Contacts
M. Celeste Simon <geo@ncbi.nlm.nih.gov>, M C Simon, Michael S Nakazawa
MINSEQE
Exp. designProtocolsVariablesProcessedSeq. reads
Files
Investigation descriptionE-GEOD-67672.idf.txt
Sample and data relationshipE-GEOD-67672.sdrf.txt
Additional data (1)E-GEOD-67672.additional.1.zip
Links