Please note that we have stopped the regular imports of Gene Expression Omnibus (GEO) data into ArrayExpress. This may not be the latest version of this experiment.
E-GEOD-64952 - Transcriptional Analysis of Deinococcus radiodurans for Novel sRNAs expression that are Differentially Expressed under Ionizing Radiation
Released on 22 January 2015, last updated on 4 February 2015
Deinococcus radiodurans R1
In this study, we identified potential sRNA candidates in D. radiodurans by a whole transcriptome deep sequencing analysis, and confirm the expression of 31 sRNAs in D. radiodurans with Northern blotting analysis and RT-PCR. A total of 8 confirmed sRNAs showed differential expression during recovery after acute ionizing radiation (15 kGy). Two samples (sham and 15kGy irradiated) were sequenced.
RNA-seq of non coding RNA
Chen-Hsun Tsai <firstname.lastname@example.org>, Lydia M Contreras