Please note that we have stopped the regular imports of Gene Expression Omnibus (GEO) data into ArrayExpress. This may not be the latest version of this experiment.

E-GEOD-64733 - Identification of molecules from dying cells that act as signals to promote proliferation of surrounding cells

Status
Released on 8 January 2015, last updated on 9 January 2015
Organism
Rattus norvegicus
Samples (4)
Array (1)
Protocols (7)
Description
To elucidate the mechanisms underlying epithelial homeostasis, we explored molecules that might serve as “danger” signals in mediating epithelial regeneration with microarray. We hypothesize that soluble factors may have been released from damaged cells to stimulate the proliferation of surviving epithelial cells. In elucidating the mechanism of dying cell-to-surviving cell communication using normal rat kidney NRK-52E epithelial cells, we observed gene expression profiles in these cells after the induction of cell death using hydrogen peroxide. The results demonstrated up-regulation of Interleukin-6, Heme oxygenase-1 and Hypoxia inducible factor-1 alpha in dying cells. Global gene expression changes were measured after induction of cell death in NRK-52E cells after incubation with hydrogen peroxide. Hydrogen peroxide (0, 0.003, 0.006, 0.009% in DMEM) was teated for 1 hour. After wash with PBS, cells were incubated with non-serum DMEM for 12 hours.
Experiment type
transcription profiling by array 
Contacts
Shunsaku Nakagawa
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-64733.idf.txt
Sample and data relationshipE-GEOD-64733.sdrf.txt
Raw data (1)E-GEOD-64733.raw.1.zip
Processed data (1)E-GEOD-64733.processed.1.zip
Array designA-MEXP-784.adf.txt
Links