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E-GEOD-63313 - transcriptome of Amycolatopsis mediterranei U32 in the Bennet medium with or without nitrate

Status
Released on 1 July 2015, last updated on 19 August 2015
Organism
Amycolatopsis mediterranei U32
Samples (4)
Protocols (2)
Description
We reported transcriptome profiles of rifamycin SV-produced strain Amycolatopsis mediterranei U32 in the Bennet medium with or without 80 mM nitrate in different cultivation stage. By comparative analysis of genome-wide gene expression in these conditions, we found that the mechanism of high production of rifamycin SV induced by nitrate could be elucidated. Examination of 2 time-course transcription in 2 different nitrogen source conditions
Experiment type
RNA-seq of coding RNA 
Contacts
shao zhihui <heln79890271@126.com>, Shao Zhihui, Wang Jin
MINSEQE
Exp. designProtocolsVariablesProcessedSeq. reads
Files
Investigation descriptionE-GEOD-63313.idf.txt
Sample and data relationshipE-GEOD-63313.sdrf.txt
Additional data (1)E-GEOD-63313.additional.1.zip
Links