Please note that we have stopped the regular imports of Gene Expression Omnibus (GEO) data into ArrayExpress. This may not be the latest version of this experiment.
E-GEOD-6221 - Characterization of anaerobic catabolism of p-coumarate in Rhodopseudomonas palustris
Released on 7 May 2008, last updated on 27 March 2012
To address the question of how photosynthetic bacterium Rhodopseudomonas palustris metabolize lignin derived compound p-coumarate, transcriptomics and quantitative proteomics were combined to characterize gene expression profiles at both the mRNA level and protein level in Rhodopseudomonas palustris grown with succinate, benzoate, and p-coumarate as the carbon source. Transcriptome profiles among Rhodopseudomonas palustris cells grown with succinate, benzoate, and p-coumarate as the carbon source were compared.
unknown experiment type
Yasuhiro Oda <firstname.lastname@example.org>, Bing Zhang, Caroline S Harwood, Chongle Pan, Dale A Pelletier, Nagiza F Samatova, Patricia K Lankford, Robert L Hettich, Yasuhiro Oda
Characterization of anaerobic catabolism of p-coumarate in Rhodopseudomonas palustris by integrating transcriptomics and quantitative proteomics. Pan C, Oda Y, Lankford PK, Zhang B, Samatova NF, Pelletier DA, Harwood CS, Hettich RL. , PMID:18156135