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E-GEOD-6207 - Transcription profiling of human HepG2 cell line overexpressing miR-124 sampled at multiple times points to study the targets and functions of miR-124

Status
Submitted on 1 November 2006, released on 1 November 2007, last updated on 27 March 2012
Organism
Homo sapiens
Samples (14)
Array (1)
Protocols (4)
Description
This time course analysis is to study the targets and functions of miR-124. MiR-124 was overexpressed and the effect of miR-124 overexpression was compared to negative controls to identify downregulated genes and potential miRNA targets. Experiment Overall Design: one array for each time point of miR-124 and negative control transfections
Experiment types
transcription profiling by array, co-expression, time series
Contact
Xiaowei Wang
Citation
Systematic identification of microRNA functions by combining target prediction and expression profiling. Xiaowei Wang, Xiaohui Wang. Nucleic Acids Res 34(5):1646-52 (2006)
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-6207.idf.txt
Sample and data relationshipE-GEOD-6207.sdrf.txt
Raw data (1)E-GEOD-6207.raw.1.zip
Processed data (1)E-GEOD-6207.processed.1.zip
Array designA-AFFY-44.adf.txt
R ExpressionSetE-GEOD-6207.eSet.r
Links