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E-GEOD-61464 - Global mapping of ribonucleotides embedded in DNA

Status
Released on 15 January 2015, last updated on 1 April 2015
Organism
Saccharomyces cerevisiae
Samples (9)
Protocols (2)
Description
Capture and massively parallel DNA sequencing of ribonucleotides embedded in S. cerevisiae genomic DNA We developed a new method to map the positions of ribonucleotides embedded in DNA using the unique specificity of A. thaliana tRNA ligase. Ribonucleotides were generated in budding yeasts of different genetic backgrounds and mapped to single nucleotide resolution using the new method.
Experiment type
other 
Contacts
Jay R. Hesselberth <jay.hesselberth@gmail.com>, Francesca Storici, Jay Hesselberth
MINSEQE
Exp. designProtocolsVariablesProcessedSeq. reads
Files
Investigation descriptionE-GEOD-61464.idf.txt
Sample and data relationshipE-GEOD-61464.sdrf.txt
Processed data (1)E-GEOD-61464.processed.1.zip
Links