Please note that we have stopped the regular imports of Gene Expression Omnibus (GEO) data into ArrayExpress. This may not be the latest version of this experiment.

E-GEOD-60149 - Global hepatic transcript data from fasted male BXD strains on chow or high fat diet

Status
Released on 11 September 2014, last updated on 13 September 2014
Organism
Mus musculus
Samples (81)
Array (1)
Protocols (7)
Description
Transcript data from livers from fasted-state BXD strains on chow or high fat diet We used microarrays to compare the hepatic expression differences across the BXD strain family and across two diverse diets 29-week-old male mice were fasted overnight (6pm-9am), anesthetized under isoflurane, and perfused, then livers were snap-frozen in liquid nitrogen for RNA extraction and RNEasy cleanup. Each dietary and strain cohort consisted of ~5 animals which were prepared independently then pooled evenly by µg RNA before the Affymetrix arrays were run.
Experiment type
transcription profiling by array 
Contacts
Evan G Williams, Johan Auwerx
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-60149.idf.txt
Sample and data relationshipE-GEOD-60149.sdrf.txt
Raw data (2)E-GEOD-60149.raw.1.zip, E-GEOD-60149.raw.2.zip
Processed data (1)E-GEOD-60149.processed.1.zip
Additional data (1)E-GEOD-60149.additional.1.zip
Array designA-AFFY-130.adf.txt
Links