Please note that we have stopped the regular imports of Gene Expression Omnibus (GEO) data into ArrayExpress. This may not be the latest version of this experiment.

E-GEOD-6008 - Transcription profiling of human ovarian tumors and normal ovaries

Status
Submitted on 10 October 2006, released on 14 June 2008, last updated on 27 March 2012
Organism
Homo sapiens
Samples (103)
Array (1)
Protocols (4)
Description
99 individual ovarian tumors (37 endometrioid, 41 serous, 13 mucinous, and 8 clear cell carcinomas) and 4 individual normal ovary samples, each assayed on an Affymetrix HG_U133A array Experiment Overall Design: 99 individual ovarian tumors (37 endometrioid, 41 serous, 13 mucinous, and 8 clear cell carcinomas) and 4 individual normal ovary samples. RNA expression was analyzed using one Affymetrix HG_U133A array per sample.
Experiment types
transcription profiling by array, unknown experiment type
Contact
Citation
Fibroblast growth factor 9 has oncogenic activity and is a downstream target of Wnt signaling in ovarian endometrioid adenocarcinomas. Neali D Hendrix, Rong Wu, Rork Kuick, Donald R Schwartz, Eric R Fearon, Kathleen R Cho. Cancer Res 66(3):1354-62 (2006)
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-6008.idf.txt
Sample and data relationshipE-GEOD-6008.sdrf.txt
Raw data (3)E-GEOD-6008.raw.1.zip, E-GEOD-6008.raw.2.zip, E-GEOD-6008.raw.3.zip
Processed data (1)E-GEOD-6008.processed.1.zip
Array designA-AFFY-33.adf.txt
R ExpressionSetE-GEOD-6008.eSet.r
Links