Please note that we have stopped the regular imports of Gene Expression Omnibus (GEO) data into ArrayExpress. This may not be the latest version of this experiment.

E-GEOD-59280 - Microarray Analysis Reveals a Role of the Notch System in Ciona Siphon Regeneration

Status
Released on 1 August 2015, last updated on 19 August 2015
Organism
Ciona intestinalis
Samples (8)
Array (1)
Protocols (7)
Description
Microarray analysis indicated many changes in gene expression, including genes related the the Notch signaling system, during oral siphon regeneration in adult Ciona. Subsequent qPCR gene expression and inhibitor of experiments confirm a role of the Notch system, probably in the formation of a regeneration blastema. To identify the genes defferentially expressed in degenerating siphone, gene expressions in intact siphones and excised siphones (after 3 days, 6 days and 9 days) were examined.
Experiment type
transcription profiling by array 
Contacts
Mayuko Hamada <hamadam@oist.jp>, Mardi Byerly, Nori Satoh, Spela Goricki, William R Jeffery
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-59280.idf.txt
Sample and data relationshipE-GEOD-59280.sdrf.txt
Raw data (1)E-GEOD-59280.raw.1.zip
Processed data (1)E-GEOD-59280.processed.1.zip
Array designA-GEOD-5576.adf.txt
Links