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E-GEOD-58675 - Transcriptional profiling of PRDM2 Knock down vs.controlGFPsh proliferating C2C12 Myoblasts

Status
Released on 30 June 2015, last updated on 19 August 2015
Organism
Mus musculus
Samples (4)
Array (1)
Protocols (7)
Description
Knockdown of PRDM2 led to precocious differentiation. To understand the molecular basis for this phenotype, we performed microaary analysis of growing myoblasts. Genes differentially regulated by PRDM2 knock down were reveraled by microarray analysis using NIA15K mouse chips. Control and knock down cells were grown in proliferating conditions
Experiment type
transcription profiling by array 
Contacts
Amena Saleh, Deepika Puri, Hardik Gala, Henrik D Schroeder, Jeeva Sellathurai, Jyotsna Dhawan, Malini S Pillai, Mohammed Rumman, Prethish Sreenivas, Rakesh Mishra, Reety Arora, Sirisha Cheedipudi
Citation
A fine balance: epigenetic control of cellular quiescence by the tumor suppressor PRDM2/RIZ at a bivalent domain in the cyclin a gene. Cheedipudi S, Puri D, Saleh A, Gala HP, Rumman M, Pillai MS, Sreenivas P, Arora R, Sellathurai J, Schroeder HD, Mishra RK, Dhawan J.
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-58675.idf.txt
Sample and data relationshipE-GEOD-58675.sdrf.txt
Raw data (1)E-GEOD-58675.raw.1.zip
Processed data (1)E-GEOD-58675.processed.1.zip
Array designA-GEOD-18846.adf.txt
Links