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E-GEOD-5596 - Suz12 ChIP-chip using Avi-6k-hu

Status
Submitted on 23 August 2006, released on 25 June 2010, last updated on 4 May 2014
Organism
Homo sapiens
Samples (6)
Array (1)
Protocols (6)
Description
The polycomb group (PcG) protein, EZH2, possesses oncogenic properties for which the underlying mechanism is unclear. In this set of experiments, we sought to identify a robust set of Suz12-occupied gene promoters in prostate cancer cell lines. Genome-wide location analysis (ChIP-chip) of SUZ12 was performed in both the PC3 and LNCaP prostate cancer cell lines using an IgG ChIP-chip as a control. There are total 3 hybridizations, including IgG ChIP-chip of PC3 cells, Suz12 ChIP-chip of PC3 and LNCaP cells.
Experiment type
unknown experiment type 
Contacts
Citation
Integrative genomics analysis reveals silencing of beta-adrenergic signaling by polycomb in prostate cancer. Yu J, Cao Q, Mehra R, Laxman B, Yu J, Tomlins SA, Creighton CJ, Dhanasekaran SM, Shen R, Chen G, Morris DS, Marquez VE, Shah RB, Ghosh D, Varambally S, Chinnaiyan AM.
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-5596.idf.txt
Sample and data relationshipE-GEOD-5596.sdrf.txt
Processed data (1)E-GEOD-5596.processed.1.zip
Array designA-GEOD-4216.adf.txt
Links