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E-GEOD-55895 - Profiling of copy-number variation in tumors from heterozygous and homozygous Tp53C273X knockout rats

Status
Released on 9 April 2015, last updated on 10 April 2015
Organism
Rattus norvegicus
Samples (56)
Array (1)
Protocols (4)
Description
We used Nimblegen HD aCGH to detect copy-number variants between tumor and ear control-DNA samples from heterozygous and homozygous Tp53C273X knockout rats Comparison of tumor DNA with ear control-DNA from the same animal
Experiment type
comparative genomic hybridization by array 
Contacts
Marieke Simonis, Roel Hermsen
Citation
Lack of Major Genome Instability in Tumors of p53 Null Rats. Hermsen R, Toonen P, Kuijk E, Youssef SA, Kuiper R, van Heesch S, de Bruin A, Cuppen E, Simonis M.
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-55895.idf.txt
Sample and data relationshipE-GEOD-55895.sdrf.txt
Array designA-GEOD-9991.adf.txt
Links