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E-GEOD-54186 - Discovery of consensus gene signature and intermodular connectivity defining self-renewal of human embryonic stem cells

Status
Released on 18 January 2014, last updated on 3 June 2014
Organism
Homo sapiens
Samples (8)
Array (1)
Protocols (6)
Description
Comparison of gene expression signatures in undifferentiated hESCs against differentiated embryoid bodies to identify key signatures defining self-renewal of hESCs. Using H1 and H9 hESC lines, we performed gene expression microarray analysis (Affymetrix Human Genome U133 Plus 2.0 Array) and analyzed the interaction patterns of 54,614 genes using WGCNA in R programming
Experiment type
transcription profiling by array 
Contacts
Yong Kim <thadyk@ucla.edu>, AmirHosien Namazi, Connie Lee, Jeffrey J Kim, Omar Khalid, Omid Elie, Thanh G Tu
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-54186.idf.txt
Sample and data relationshipE-GEOD-54186.sdrf.txt
Raw data (1)E-GEOD-54186.raw.1.zip
Processed data (1)E-GEOD-54186.processed.1.zip
Array designA-AFFY-44.adf.txt
Links