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E-GEOD-53900 - Involvement of viral miRNA in the regulation of antiviral apoptosis in shrimp

Status
Released on 9 January 2014, last updated on 3 June 2014
Organism
Marsupenaeus japonicus
Samples (9)
Array (1)
Protocols (5)
Description
In this study, the viral miRNAs from white spot syndrome virus (WSSV) were characterized in shrimp in vivo. On the basis of our previous study and small RNA sequencing in this study, a total of 89 putative WSSV miRNAs were identified. As revealed by miRNA microarray analysis, the expressions of viral miRNAs were tissue-specific in vivo. In this study, the viral miRNAs from white spot syndrome virus (WSSV) were characterized in shrimp in vivo. On the basis of our previous study and small RNA sequencing in this study, a total of 89 putative WSSV miRNAs were identified. As revealed by miRNA microarray analysis and Northern blots, the expressions of viral miRNAs were tissue-specific in vivo. Therefore, our study presented the first report on the in vivo molecular events of viral miRNA in the antiviral apoptosis.
Experiment type
transcription profiling by array 
Contacts
Tianzhi Huang <tanz476@126.com>, Xiaobo Zhang, Yalei Cui
Citation
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-53900.idf.txt
Sample and data relationshipE-GEOD-53900.sdrf.txt
Raw data (1)E-GEOD-53900.raw.1.zip
Processed data (1)E-GEOD-53900.processed.1.zip
Array designA-GEOD-18147.adf.txt
Links