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E-GEOD-53304 - Deep sequencing reveals divergent expression patterns within the small RNA transcriptomes of cultured and vegetative tissues of sugarcane

Released on 13 December 2013, last updated on 15 April 2014
Saccharum sp.
Samples (7)
Protocols (2)
We report the deep sequencing of small RNA populations derived from apex, internode 3, internode 6, internode 16, leaf +3, calli and suspesion cells from sugarcane cultivar Q117 Each vegetative tissue was sampled from three independent field grown plants, pooled and sequenced using the GAIIx platform. Calli and suspension cell cultures were sequenced using the HiSeq 2000 platform.
Experiment type
RNA-seq of non coding RNA 
Peter Richard Sternes <>, Peter R Sternes, Richard L Moyle
Exp. designProtocolsVariablesProcessedSeq. reads
Investigation descriptionE-GEOD-53304.idf.txt
Sample and data relationshipE-GEOD-53304.sdrf.txt
Processed data (1)