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E-GEOD-52101 - Transcript abundance comparison between BALB/c ears inoculated with Leishmania mexicana and Leishmania mexicana plus promastigote secretory gel (PSG)

Status
Released on 17 December 2013, last updated on 3 June 2014
Organism
Mus musculus
Samples (17)
Array (1)
Protocols (7)
Description
To determine the modulation of gene expression of Leishmania mexicana(M379)-inoculated BALB/c ears in the presence of promastigote secretory gel (PSG) A genome-wide transcriptional analysis was performed by comparing the gene expression profiles of Leishmania mexicana- inoculated BALB/c ears and Leishmania mexicana plus PSG BALB/c ears. Leishmania mexicana amastigotes were purified from mouse cutaneous lesions and transformed in vitro in metacycic promastigotes (MT). After 6, 24 and 48 hours, ears were collected and processed for RNA extraction. Three Biological replicates per condition were run.
Experiment type
transcription profiling by array 
Contacts
Emilie De La Llave Giraud <Emilie.Giraud@lshtm.ac.uk>, Emilie Giraud, Matthew Rogers, Paul Bates, Rod Dillon
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-52101.idf.txt
Sample and data relationshipE-GEOD-52101.sdrf.txt
Raw data (1)E-GEOD-52101.raw.1.zip
Processed data (1)E-GEOD-52101.processed.1.zip
Additional data (1)E-GEOD-52101.additional.1.zip
Array designA-AFFY-45.adf.txt
Links