Please note that we have stopped the regular imports of Gene Expression Omnibus (GEO) data into ArrayExpress. This may not be the latest version of this experiment.

E-GEOD-50990 - Intronic Non-CG DNA Hydroxymethylation and Alternative mRNA Splicing in Honey Bees

Released on 19 September 2013, last updated on 2 May 2014
Apis mellifera, Apis mellifera scutellata
Samples (8)
Protocols (6)
Honey bee non-CG DNA hydroxymethylation is enriched in the introns, which supplements previous findings that honey bee CG DNA methylation is enriched in exons. Bisulfite sequencing combined with Pvu-Seq to distinguish 5-methylcytosine from 5-hydroxymethylcytosine and RNA-Seq
Experiment types
methylation profiling by high throughput sequencing, RNA-seq of coding RNA 
Aliccia Bollig-Fischer, Alya’a Sammak, Chieh-Chun Chen, Douglas M Ruden, Gene E Robinson, Mark D Garfinkel, Matthew E Hudson, Melissa Coon, Pablo Cingolani, Radhika Khetani, Sheng Zhong, Susan Land, Xiaoyi Cao, Yun Huang
Exp. designProtocolsVariablesProcessedSeq. reads