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E-GEOD-50049 - Evolution at two regulatory levels in yeast

Status
Released on 29 November 2013, last updated on 3 June 2014
Organism
Saccharomyces cerevisiae, Saccharomyces cerevisiae x Saccharomyces paradoxus, Saccharomyces paradoxus
Samples (10)
Protocols (4)
Description
Ribosome profiling performed on interspecific hybrids of Sacharromyces cerevisiae and S. paradoxus in order to identify allele-specific expression indicative of cis-regulatory divergence at the level of mRNA abundance and protein translation. Two biological replicate libraries sequenced from ribosome protected fragments as well as poly-A-selected mRNA of hybrids in addition to one biological replicate library of poly-A selected mRNA from each parental strain.
Experiment type
RNA-seq of coding RNA 
Contacts
Carlo G. Artieri <carlo.artieri@gmail.com>, Carlo G Artieri, Hunter B Fraser
MINSEQE
Exp. designProtocolsVariablesProcessedSeq. reads
Files
Investigation descriptionE-GEOD-50049.idf.txt
Sample and data relationshipE-GEOD-50049.sdrf.txt
Additional data (1)E-GEOD-50049.additional.1.zip
Links