E-GEOD-49396 - Affymetrix SNP 6.0 data for analysis of esophageal adenocarcinoma samples

Status
Released on 1 December 2013, last updated on 9 December 2013
Organism
Homo sapiens
Samples (82)
Array (1)
Protocols (4)
Description
Esophageal adenocarcinoma is characterized by complex chromosomal alterations. Tumors were evaluated to identify regions of recurrent copy gains and losses and to determine the prognositic significance of the degree of segmental aneuploidy as measured by SNP array. 41 superficial esophageal adenocarcinomas were analyzed for copy number abnormalities. Matched normal lymph node tissue was used as a copy number reference.
Experiment types
genotyping by array, comparative genomic hybridization by array 
Contacts
William Armand LaFramboise <laframboisewa@upmc.edu>, Jon Davison, William LaFramboise
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-49396.idf.txt
Sample and data relationshipE-GEOD-49396.sdrf.txt
Raw data (11)Click to browse raw data
Array designA-AFFY-142.adf.txt
Links