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E-GEOD-48610 - Measuring cell-type specific differential methylation in human brain tissue

Status
Released on 8 August 2013, last updated on 3 June 2014
Organism
Homo sapiens
Samples (182)
Array (1)
Protocols (4)
Description
We investigated genome-wide DNA methylation of NeuN+ and NeuN- fractions in three brain regions using comprehensive high throughput arrays for relative methylation (CHARM). We isolated genomic DNA from cell-sorted post-mortem brains using NeuN antibody and hybridized to Nimblegen microarrays (091020_HG19_CHARM_HX1 arrays).
Experiment type
methylation profiling by array 
Contacts
Carolina M Montano <geo@ncbi.nlm.nih.gov>, Andrew P Feinberg, Carolina Montano, Konrad Talbot, Margaret A Taub, Rafael Irizarry, Raquel E Gur, Walter E Kaufmann
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-48610.idf.txt
Sample and data relationshipE-GEOD-48610.sdrf.txt
Raw data (14)Click to browse raw data
Additional data (2)E-GEOD-48610.additional.1.zip, E-GEOD-48610.additional.2.zip
Array designA-GEOD-13611.adf.txt
Links