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E-GEOD-48516 - ChIP-seq in MEG3+ and MEG3- hIPSCs

Status
Released on 25 December 2013, last updated on 13 May 2014
Organism
Homo sapiens
Samples (35)
Protocols (2)
Description
In this experiment we sought to identify region with differential PRC2, JARID2, and H3K27me3 occupancy in human induced pluripotent stem cell lines with silenced or expressed MEG3 locus to indirectly determine the effect of this ncRNA on PRC2 function. 8 hIPSC lines, 5 MEG3+ and 3 MEG3-; ChIP-seq for EZH2, JARID2, and H3K27me3. Some done in replicates.
Experiment type
ChIP-seq 
Contacts
Roberto Bonasio <geo@ncbi.nlm.nih.gov>, Danny Reinberg, Syuzo Kaneko
MINSEQE
Exp. designProtocolsVariablesProcessedSeq. reads
Files
Investigation descriptionE-GEOD-48516.idf.txt
Sample and data relationshipE-GEOD-48516.sdrf.txt
Processed data (11)Click to browse processed data
Links