7 protocols
AccessionType
array scanning protocol
Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
normalization data transformation protocol
Beadstudio ID_REF = VALUE = Average Beta Detection.Pval =
normalization data transformation protocol
Beadstudio. The 'non-normalized.txt' data matrix contains Unmethylated (Signal A) and methylated (signal B) signal intensities. ID_REF = VALUE = Average Beta Detection.Pval =
hybridization protocol
bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation27 Beadchip using standard Illumina protocol
hybridization protocol
bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol
labelling protocol
Standard Illumina Protocol
nucleic acid extraction protocol
genomic DNA was isolated from 5-40 cryostat sections of 40 μm thickness using the QIAamp DNA mini kit