E-GEOD-48180 - myb118 mutation; Identification of genes misregulated in developing seeds of Arabidopsis in response to the myb118 mutation

Status
Released on 1 December 2013, last updated on 3 June 2014
Organism
Arabidopsis thaliana
Samples (24)
Array (1)
Protocols (26)
Description
ra12-06_myb118; myb118 mutation What are the genes over expressed or down regulated in seeds in response to a myb118 mutation? Plants of the different genotypes (wild-type, myb118 mutant, myb118 antisense lines named 0E3 and T16) were grown in a green house, their flower were tagged and seeds were harvested 10 days after anthesis. Seeds were extracted from the siliques, stored at -80°C prior to RNA extraction. 6 dye-swap - normal vs transgenic comparaison
Experiment type
transcription profiling by array 
Contacts
Soubigou-Taconnat Ludivine <soubigou@evry.inra.fr>, Ludivine Taconnat, Marie-Laure Martin-Magniette, Sandrine Balzergue, Sébastien Baud
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-48180.idf.txt
Sample and data relationshipE-GEOD-48180.sdrf.txt
Raw data (2)E-GEOD-48180.raw.1.zip, E-GEOD-48180.raw.2.zip
Processed data (1)E-GEOD-48180.processed.1.zip
Array designA-GEOD-17404.adf.txt
Links