7 protocols
normalization data transformation protocol
Array Features were calculated using AFE default settings for the GE2-v5_10_Apr08. Using limma, a linear model fite was applied and the top differetnially expressed genes were tabulated for each contrast using the method of Benjamini and Hochberg to correct p-values ID_REF = VALUE = Quantile normailsed
array scanning protocol
standard protocol from Agilent
hybridization protocol
standard protocol from Agilent
labelling protocol
Cy3 standard protocol from agilent
growth protocol
Culture at OD 0.6 at 600nm in LB broth
sample treatment protocol
culure at 37c or 42c
nucleic acid extraction protocol
Qiagen mini kit