E-GEOD-46475 - Expression data from maize stems attacked by European corn borer (ECB, Ostrinia nubilalis) larvae

Status
Released on 1 June 2013, last updated on 14 December 2015
Organism
Zea mays
Samples (6)
Array (1)
Protocols (7)
Description
ECB larvae remain damaging pests of conventiational maize production. To better understand the physiological and molecular changes occuring in stem tissue during insect attack we explored the biochemical and transcriptional profiles in these tissues. We used microarrays to detail the transcriptional changes associated with ECB attack and considered these in the context of biochemical markers of plant defense and total protein levels. Maize internode tissue was selected from untreated control plants and those which 5th instar ECB larvae had bored into for 48 h for RNA extraction and hybridization on Affymetrix microarrays.
Experiment type
transcription profiling by array 
Contacts
Alisa Huffaker <alisa.huffaker@gmail.com>, Eric Schmelz, Nicole Dafoe
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-46475.idf.txt
Sample and data relationshipE-GEOD-46475.sdrf.txt
Raw data (1)E-GEOD-46475.raw.1.zip
Processed data (1)E-GEOD-46475.processed.1.zip
Array designA-AFFY-77.adf.txt
Links