5 protocols
array scanning protocol
Standard Illumina scanning protocol
normalization data transformation protocol
The data were normalised using quantile normalisation with Illumina Genome Studio software ID_REF = VALUE = quantile normalized Detection Pval =
hybridization protocol
Standard Illumina hybridization protocol
labelling protocol
Biotinylated cRNA were prepared with the Illumina TotalPrep RNA amplification kit.
nucleic acid extraction protocol
RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent2100 Bioanalyser.