E-GEOD-45017 - STOP2 activated transcription in the stop1-mutant: STOP2-complemented lines (stop1-mutant with transformed STOP2) vs. stop1-mutant of Arabidopsis

Status
Released on 21 October 2013, last updated on 2 June 2014
Organism
Arabidopsis thaliana
Samples (12)
Array (1)
Protocols (7)
Description
Transcriptional profiling of genes recoverd by STOP2-complementation in the stop1-mutant (STOP2 expression is repressed in the stop1-mutant). The roots were exposed to Al and low pH stressed conditions, then genes recovered expression were analyzed. Goal is identifying the genes can be actevated the expression by STOP2. Two-condition experiment, STOP2-complemented lines (stop1-mutant backgoround) v.s. stop1-mutant. Biological replicates: 3 of low pH treatments replicates, 3 Al treatment replicates.
Experiment type
transcription profiling by array 
Contacts
Yuriko Kobayashi <geo@ncbi.nlm.nih.gov>, Hiroyuki Koyama, Yasufumi Kobayashi
Citation
STOP2 Activates Transcription of Several Genes for Al- and Low pH-Tolerance that Are Regulated by STOP1 in Arabidopsis. Kobayashi Y, Ohyama Y, Kobayashi Y, Ito H, Iuchi S, Fujita M, Zhao CR, Tanveer T, Ganesan M, Kobayashi M, Koyama H. , Europe PMC 23935008
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-45017.idf.txt
Sample and data relationshipE-GEOD-45017.sdrf.txt
Raw data (1)E-GEOD-45017.raw.1.zip
Processed data (1)E-GEOD-45017.processed.1.zip
Array designA-MEXP-1038.adf.txt
Links