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E-GEOD-44847 - DNA methylation analysis of Rhabdoid tumor of the kidney, Clear cell sarcoma of the kidney and Ewing's sarcoma family of tumors

Status
Released on 12 June 2015, last updated on 21 June 2015
Organism
Homo sapiens
Samples (12)
Array (1)
Protocols (5)
Description
Genome wide DNA methylation profiling of Rhabdoid tumor of the kidney, Clear cell sarcoma of the kidney, Ewing's sarcoma family of tumors and non-neoplastic kidney. The Illumina Infinium HumanMethylation 27 BeadChip was used to obtain DNA methylation profiles across approximately 27000 CpGs . Samples included 3 Rhabdoid tumor of the kidney, 3 Clear cell sarcoma of the kidney, 3 Ewing's sarcoma family of tumor and 3 non-neoplastic kidney. Bisulfite converted DNA from the 12 samples were hybridized to the Illumina Infinium HumanMethylation27 Beadchip.
Experiment type
methylation profiling by array 
Contacts
Hajime Okita, Hitomi Ueno, Kazuhiko Nakabayashi, Kenichiro Hata, Nobutaka Kiyokawa
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-44847.idf.txt
Sample and data relationshipE-GEOD-44847.sdrf.txt
Processed data (1)E-GEOD-44847.processed.1.zip
Additional data (1)E-GEOD-44847.additional.1.zip
Array designA-GEOD-8490.adf.txt
Links