E-GEOD-43873 - Focal Adhesion Kinase Dependent Expression

Status
Released on 17 September 2013, last updated on 2 June 2014
Organism
Mus musculus
Samples (12)
Array (1)
Protocols (7)
Description
The goal of this study was to identify transcripts, which are differentially regulatulated in the presence and absence of Focal Adhesion Kinase. As Focal Adhesion Kinase activity can depend upon cell density (Snijder et al. Nature 2009), biological replicates where cells, were seeded very sparsely or confluently, were used. Focal Adhesion Kinase Knockout (ATCC CRL-2644) and Rescue Cells (Sieg et al. 1998, clone DA2) were seeded at two different concentrations. Replicas refer to biological replicates, performed on different days. Only one single technical replicate has been done per biological replicate.
Experiment type
transcription profiling by array 
Contacts
Berend Snijder <geo@ncbi.nlm.nih.gov>, Andrea Patrignani, Thomas Stoeger
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-43873.idf.txt
Sample and data relationshipE-GEOD-43873.sdrf.txt
Raw data (1)E-GEOD-43873.raw.1.zip
Processed data (1)E-GEOD-43873.processed.1.zip
Array designA-MEXP-724.adf.txt
Links