E-GEOD-43196 - Genome-wide analyses of GATA6 occupancy and functions provide insights into its oncogenic mechanisms in human gastric cancer (microarray)

Status
Released on 2 December 2013, last updated on 2 June 2014
Organism
Homo sapiens
Samples (8)
Array (1)
Protocols (7)
Description
To identifiy core GATA6 functions and transcriptional targets in human gastric cancer, including additional subservient transcriptional regulators via integrative analysis of GATA6 transcription factor occupancy, gene dependency, and tumor synexpression. This study used Affymetrix U133A 2.0 gene chips with 2 control and 2 treated replicates for 2 cell types.
Experiment type
transcription profiling by array 
Contacts
Oliver Marc Hofmann <ohofmann@hsph.harvard.edu>, Ramesh A Shivdasani, Rita Sulahian
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-43196.idf.txt
Sample and data relationshipE-GEOD-43196.sdrf.txt
Raw data (1)E-GEOD-43196.raw.1.zip
Processed data (1)E-GEOD-43196.processed.1.zip
Array designA-AFFY-37.adf.txt
Links