Please note that we have stopped the regular imports of Gene Expression Omnibus (GEO) data into ArrayExpress. This may not be the latest version of this experiment.
E-GEOD-42626 - Methylation profiling categorizes HIV-associated lymphomas in two distinctive groups
Released on 30 January 2014, last updated on 2 June 2014
HIV-positive patients have a higher risk of non-Hodgkin's lymphoma with poor prognostic features. To characterize features of HIV-associated lymphoma, we compared the DNA methylation profiles of 803 cancer-related genes in between 9 HIV-associated and 12 non-HIV lymphoma samples by Illumina GoldenGate Methylation Cancer Panel I microarray. Bisulfite-converted DNA from the 42 samples (duplicate analysis of 21 samples) were analyzed to obtain the methylation profiles of cancer-associated genes by using Illumina GoldenGate Methylation Cancer Panel I microarray.
methylation profiling by array
Akihiro Matsunaga, Makoto Motizuki, Mari Shimura, Maria Yamazaki, Noriko Tanaka, Shotaro Hagiwara, Tsunekazu Hishima, Yukihito Ishizaka
DNA methylation profiling can classify HIV-associated lymphomas. Matsunaga A, Hishima T, Tanaka N, Yamasaki M, Yoshida L, Mochizuki M, Tanuma J, Oka S, Ishizaka Y, Shimura M, Hagiwara S. , PMID:24335480