7 protocols
AccessionType
bioassay_data_transformation
ID_REF = VALUE = RMA signal intensity
image_aquisition
Standard Affymetrix protocols for mouse ht arrays
feature_extraction
RMA algorithm was applied using the ExpressionFileCreator procedure (version 11) in the GenePattern software (http://genepattern.broadinstitute.org/gp).
hybridization
Standard Affymetrix protocols for mouse ht arrays
labeling
Standard Affymetrix protocols for mouse ht arrays
nucleic_acid_extraction
miRNEASY (QIAGEN) as recommended by manufactor
grow
mouse primary BMDCs (Gat-Viks et al. 2012)