E-GEOD-38875 - Expression evolution in gene groups: Inferring non-neutral regulatory change in pathways from transcriptional profiling data

Status
Released on 21 October 2013, last updated on 25 November 2013
Organism
Saccharomyces bayanus, Saccharomyces bayanus x Saccharomyces cerevisiae, Saccharomyces cerevisiae, Saccharomyces cerevisiae x Saccharomyces mikatae, Saccharomyces cerevisiae x Saccharomyces paradoxus, Saccharomyces mikatae, Saccharomyces paradoxus
Samples (18)
Protocols (5)
Description
We profiled the transcriptomes of four Saccharomyces species, as well as pairwise hybrids between three of the species with S. cerevisiae For pairwise comparisons between Saccharomyces cerevisiae and each of S. paradoxus, S. mikatae, and S. bayanus, we performed 3'-end RNA-seq on RNA from each parent species and each interspecific hybrid.
Experiment type
RNA-seq of coding RNA 
Contacts
Rachel B Brem, Tiffany Y Hsu, Yulia Mostovoy
Citation
MINSEQE
Exp. designProtocolsVariablesProcessedSeq. reads
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