Please note that we have stopped the regular imports of Gene Expression Omnibus (GEO) data into ArrayExpress. This may not be the latest version of this experiment.

E-GEOD-37461 - Transcription start site analysis for Thermotoga maritima [RNA-seq]

Status
Released on 2 August 2013, last updated on 5 September 2013
Organism
Thermotoga maritima MSB8
Samples (2)
Protocols (3)
Description
Investigation of 5' transcripts using strand specific sequencing for T. maritima under logphase, maltose minimal media growth conditions Two replicate samples were sequenced after isolating total RNA of cultures grown in maltose minimal media. Cells were harvested in logphase growth.
Experiment type
RNA-seq of coding RNA 
Contacts
Haythem Latif <geo@ncbi.nlm.nih.gov>, Alexandra C Schrimpe-Rutledge, Bernhard O Palsson, Dae-Hee Lee, Harish Nagarajan, Joshua A Lerman, Joshua N Adkins, Karsten Zengler, Richard D Smith, Vasiliy A Portnoy, Yekaterina Tarasova, Yu Qiu
Citation
The genome organization of Thermotoga maritima reflects its lifestyle. Latif H, Lerman JA, Portnoy VA, Tarasova Y, Nagarajan H, Schrimpe-Rutledge AC, Smith RD, Adkins JN, Lee DH, Qiu Y, Zengler K. , PMID:23637642
MINSEQE
Exp. designProtocolsVariablesProcessedSeq. reads
Files
Investigation descriptionE-GEOD-37461.idf.txt
Sample and data relationshipE-GEOD-37461.sdrf.txt
Processed data (1)E-GEOD-37461.processed.1.zip
Links