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E-GEOD-37032 - Cell type-specific chromatin profiling of Drosophila neurons [ChIP-Seq]

Status
Released on 2 August 2012, last updated on 11 March 2013
Organism
Drosophila melanogaster
Samples (16)
Protocols (2)
Description
Chromatin profiling of nuclei isolated from genetically defined neuronal subpopulations of the adult Drosophila brain. Cell type-specific histone modification maps were generated from nuclei isolated from all neurons (R57C10-GAL4), Kenyon cells (OK107-GAL4), and octopaminergic (Tdc2-GAL4) neurons using a method similar to INTACT (Deal and Henikoff, 2010; Steinner et al., 2012). Three histone modifications were profiled: H3K4me3, H3K27ac, and H3K27me3. Sequencing was performed with an Illumina HiSeq 2000.
Experiment type
ChIP-seq 
Contacts
Fred P Davis, Gilbert L Henry, Sean R Eddy, Serge Picard
Citation
Cell type-specific genomics of Drosophila neurons. Henry GL, Davis FP, Picard S, Eddy SR. , PMID:22855560
MINSEQE
Exp. designProtocolsVariablesProcessedSeq. reads
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