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E-GEOD-34816 - Clinically significant copy number alterations and complex rearrangements of MYB and NFIB in adenoid cystic carcinoma of the head and neck

Status
Released on 31 December 2012, last updated on 2 June 2014
Organism
Homo sapiens
Samples (80)
Array (1)
Protocols (7)
Description
Using high-resolution, array-based comparative genomic hybridization (aCGH), we explored genomic alterations in 40 fresh-frozen ACC samples, the largest cohort to date, with the aims to: (1) identify recurrent CNAs in ACC; (2) identify novel candidate target genes; and (3) correlate recurrent CNAs with tumour grade and other clinical parameters to identify potential clinically useful biomarkers. High-resolution aCGH on fresh frozen tissue from 40 ACCs.
Experiment type
comparative genomic hybridization by array 
Contacts
Marta Persson <marta.persson@llcr.med.gu.se>, Anders Nordkvist, Christopher A Moskaluk, Fredrik Persson, Göran Stenman, Henry F Frierson, Sven Nelander, Teresia Kling, Ywonnes Andrén
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-34816.idf.txt
Sample and data relationshipE-GEOD-34816.sdrf.txt
Raw data (12)Click to browse raw data
Processed data (1)E-GEOD-34816.processed.1.zip
Array designA-MEXP-1597.adf.txt
Links