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E-GEOD-34220 - Expression analysis of Aspergillus nidulans OE::rsmA

Status
Released on 17 January 2012, last updated on 4 May 2014
Organism
Emericella nidulans
Samples (24)
Array (1)
Protocols (7)
Description
Investigation of whole genome gene expression level changes in Aspergillus nidulans OE::rsmA compared to wild-type RDIT9.32 (veA). A twelve array study using total RNA recovered from six separate cultures of Aspergillus nidulans wild-type RDIT9.32 (veA) and six separate cultures of Aspergillus nidulans overexpressing rsmA (restorer of secondary metabolism A), using custom-designed, four-plex arrays. The experiment was divided into two runs. In the first run, three biological replicates each of Aspergillus nidulans wild-type RDIT9.32 (veA) and Aspergillus nidulans carrying a plasmid overexpressing rsmA under the control of the gpdA promoter were assayed. In the second run, three biological replicates each of Aspergillus nidulans wild-type RDIT9.32 (veA) and Aspergillus nidulans overexpressing rsmA at the native locus under the control of the gpdA promoter were assayed.
Experiment type
transcription profiling by tiling array 
Contacts
Dana J. Wohlbach <geo@ncbi.nlm.nih.gov>, Audrey P Gasch, Dana J Wohlbach, Nancy P Keller, Wenbing Yin
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-34220.idf.txt
Sample and data relationshipE-GEOD-34220.sdrf.txt
Raw data (1)E-GEOD-34220.raw.1.zip
Processed data (1)E-GEOD-34220.processed.1.zip
Array designA-GEOD-14973.adf.txt
Links