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E-GEOD-33596 - Histone Deacetylase 3 is an Epigenomic Brake in Macrophage Alternative Activation (ChIP-Seq)

Status
Released on 10 November 2011, last updated on 3 April 2013
Organism
Mus musculus
Samples (7)
Protocols (4)
Description
We report the genomic regions enriched in Histone Deacetylase 3 (HDAC3) in mouse bone marrow derived macrophages. Furthermore, we also report the genomic acetylation pattern on Histone 3, Lysine 9 (H3K9) in macrophages with and without HDAC3 and/or treated with Th2 cytokine IL-4. HDAC3 enriched genomic regions in mouse bone marrow dervied macrophages and H3K9Ac enriched genomic regions in wild-type macrophages and macrophages treated with IL-4 and/or deficient in HDAC3.
Experiment type
ChIP-seq 
Contacts
Logan J Everett <loganje@mail.med.upenn.edu>, Christine A Gaddis, Dan Feng, David Artis, David J Steger, Jonathan Schug, Meera G Nair, Mitchell A Lazar, Paul R Giacomin, Shannon E Mullican, Theresa Alenghat
Citation
Histone deacetylase 3 is an epigenomic brake in macrophage alternative activation. Mullican SE, Gaddis CA, Alenghat T, Nair MG, Giacomin PR, Everett LJ, Feng D, Steger DJ, Schug J, Artis D, Lazar MA. , PMID:22156208
MINSEQE
Exp. designProtocolsVariablesProcessedSeq. reads
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