Please note that we have stopped the regular imports of Gene Expression Omnibus (GEO) data into ArrayExpress. This may not be the latest version of this experiment.

E-GEOD-32795 - H3K4me2_JBC 1360331.D.mel 3rd Instar Larvae Nuclei Sexed Male

Released on 12 October 2011, last updated on 2 March 2012
Drosophila melanogaster
Samples (4)
Array (1)
Protocols (8)
modENCODE_submission_3689 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see Project Goal: We aim to determine the locations of the major histone modifications across the Drosophila melanogaster genome. The modifications under study are involved in basic chromosomal functions such as DNA replication, gene expression, gene silencing, and inheritance. We will perform Chromatin ImmunoPrecipitation (ChIP) using genomic tiling arrays. We will initially assay localizations using chromatin from three cell lines and two embryonic stages, and will then extend the analysis of a subset of proteins to four additional animal tissues/stages. For data usage terms and conditions, please refer to and EXPERIMENT TYPE: CHIP-chip. BIOLOGICAL SOURCE: Strain: Oregon-R(official name : Oregon-R-modENCODE genotype : wild type ); Developmental Stage: 3rd Instar Larvae; Genotype: wild type; NUMBER OF REPLICATES: 4; EXPERIMENTAL FACTORS: Strain Oregon-R(official name : Oregon-R-modENCODE genotype : wild type ); Antibody H3K4me2 JBC 1360331 (target is H3K4me2); Developmental Stage 3rd Instar Larvae
Experiment type
ChIP-chip by tiling array 
DCC modENCODE <>, Aki Minoda, Andrey Gortchakov, Art Alekseyenko, Cameron Kennedy, Gary Karpen, Greg Shanower, Michael Tolstorukov, Mitzi Kuroda, Nicole Riddle, Peter Kharchenko, Peter Park, Sarah Elgin, Vincenzo Pirrotta, Yuri Schwartz
Investigation descriptionE-GEOD-32795.idf.txt
Sample and data relationshipE-GEOD-32795.sdrf.txt
Raw data (1)
Array designA-AFFY-146.adf.txt
R ExpressionSetE-GEOD-32795.eSet.r