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E-GEOD-31315 - Expression data from SP and non-SP sorted anti-EpCAM treated A549 cells

Status
Released on 7 August 2012, last updated on 13 August 2015
Organism
Homo sapiens
Samples (12)
Array (1)
Protocols (8)
Description
Targeted therapies against cancer stem cells, which are enriched in side populations (SP), involves interruption of Wnt-signalling. Furthermore, EpCAM is a SP marker and modulator of Wnt-signalling. Therefore, the effects of an anti-EpCAM treatment on SP-cells and WNT/β-catenin signalling was studied. SP of the human lung adenocarcinoma cell line A549 was obtained by fluorescence activated cell sorting and whole genome scans helped to define their molecular phenotype after anti-EpCAM antibody treatment. Anti-EpCAM treated and untreated A549 cells were subjected to Hoechst 33342 dye exclusion assay and sorted to SP and non-SP fractions by FACS. Three biological replicates.
Experiment type
transcription profiling by array 
Contacts
Astrid Rohrbeck, Thomas Krüwel
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-31315.idf.txt
Sample and data relationshipE-GEOD-31315.sdrf.txt
Raw data (1)E-GEOD-31315.raw.1.zip
Processed data (1)E-GEOD-31315.processed.1.zip
Array designA-AFFY-44.adf.txt
Links