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E-GEOD-30281 - Transcript profiling of Arabidopsis albino msh1 mutants

Status
Released on 29 November 2011, last updated on 30 April 2015
Organism
Arabidopsis thaliana
Samples (6)
Array (1)
Protocols (7)
Description
The soybean msh1 RNAi transgenic line show various growth phenotype. We use microarray analysis to characterize gene expression pattern for two of the phenotypes - variegation and stunted growth. Wild type and Arabidopsis msh1 mutant albino tissues were collected for RNA extration and hybridization on Affymetrix.
Experiment type
transcription profiling by array 
Contacts
Citation
MutS HOMOLOG1 is a nucleoid protein that alters mitochondrial and plastid properties and plant response to high light. Xu YZ, Arrieta-Montiel MP, Virdi KS, de Paula WB, Widhalm JR, Basset GJ, Davila JI, Elthon TE, Elowsky CG, Sato SJ, Clemente TE, Mackenzie SA. , PMID:21934144
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-30281.idf.txt
Sample and data relationshipE-GEOD-30281.sdrf.txt
Raw data (1)E-GEOD-30281.raw.1.zip
Processed data (1)E-GEOD-30281.processed.1.zip
Array designA-AFFY-2.adf.txt
Links