E-GEOD-29310 - R.palustris: cbbT1 overexpression and cbbT2 overexpression

Status
Released on 6 May 2014, last updated on 2 June 2014
Organism
Rhodopseudomonas palustris
Samples (4)
Array (1)
Protocols (7)
Description
Transcriptional profiling of Rhodopseudomonas palustris (R. palustris) comparing cbbT1 over-expressing strain with cbbT2 over-expressing strain. Goal was to discriminate the molecular mechanisms between transketolase I (cbbT1) and transketolase II (cbbT2). R.palustris is a purple non-sulfur anoxygenic phototrophic bacterium and transketolase (cbbT1 and cbbT2) is a key enzyme involved in the CBB cycle. Here, we investogated the functions of transketolase isoforms I (cbbT1) and II (cbbT2) in R. palustris through transcriptional profiling and other functional assays. Four-condition experiment, cbbT1 over-expressing cells, cbbT2 over-expressing cells, Negative control strain with empty plasmid, Wild type strain.
Experiment type
transcription profiling by array 
Contacts
Citation
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-29310.idf.txt
Sample and data relationshipE-GEOD-29310.sdrf.txt
Raw data (1)E-GEOD-29310.raw.1.zip
Processed data (1)E-GEOD-29310.processed.1.zip
Array designA-GEOD-13538.adf.txt
Links