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E-GEOD-28822 - Thermotoga maritima wild type minimal media expression analysis

Status
Released on 2 July 2012, last updated on 3 May 2014
Organism
Thermotoga maritima MSB8
Samples (8)
Array (1)
Protocols (7)
Description
An eight chip study using total RNA recovered from separate wild-type cultures of Thermotoga maritima at mid-log with 3 different minimal sugar media. A eight-chip study using total RNA recovered from separate wild-type cultures of Thermotoga maritima at mid-log with 3 different minimal sugar media. 4 biological replicates maltose, 2 biological replicates L-arabinose, 2 biological replicates cellobiose.
Experiment type
transcription profiling by tiling array 
Contacts
Daniel R Hyduke <danielhyduke@gmail.com>, Haythem Latif, Joshua A Lerman
Citation
In silico method for modelling metabolism and gene product expression at genome scale. Lerman JA, Hyduke DR, Latif H, Portnoy VA, Lewis NE, Orth JD, Schrimpe-Rutledge AC, Smith RD, Adkins JN, Zengler K, Palsson BO. , PMID:22760628
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-28822.idf.txt
Sample and data relationshipE-GEOD-28822.sdrf.txt
Raw data (1)E-GEOD-28822.raw.1.zip
Processed data (1)E-GEOD-28822.processed.1.zip
Additional data (1)E-GEOD-28822.additional.1.zip
Array designA-GEOD-13446.adf.txt
Links