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E-GEOD-28552 - Expression profiles of human primary keratinocytes differentiated with TPA

Status
Released on 12 April 2011, last updated on 3 May 2014
Organism
Homo sapiens
Samples (14)
Array (1)
Protocols (8)
Description
Human primary keratinocytes were left untreated or treated for 48 hr with 12-O-tetradecanoylphorbol-13-acetate (TPA) and expression profiles were compared to find long ncRNAs expressed and differentially regulated upon differentiation. 4 replicates of minus TPA and 3 of plus TPA with dye-swap. Custom-made microarray from Agilent.
Experiment type
transcription profiling by array 
Contacts
Ulf Andersson Ørom <uorom@wistar.org>, Ramin Shiekhattar, Ulf A Ørom
Citation
Long noncoding RNAs with enhancer-like function in human cells. �rom UA, Derrien T, Beringer M, Gumireddy K, Gardini A, Bussotti G, Lai F, Zytnicki M, Notredame C, Huang Q, Guigo R, Shiekhattar R. , PMID:20887892
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-28552.idf.txt
Sample and data relationshipE-GEOD-28552.sdrf.txt
Raw data (1)E-GEOD-28552.raw.1.zip
Processed data (1)E-GEOD-28552.processed.1.zip
Array designA-GEOD-13402.adf.txt
R ExpressionSetE-GEOD-28552.eSet.r
Links