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E-GEOD-28284 - DNA methylation analysis of normal and cancer cells

Status
Released on 6 June 2011, last updated on 2 May 2014
Organism
Homo sapiens
Samples (10)
Array (1)
Protocols (8)
Description
DNA methylation of prostatic normal cells (PrEC), normal mammary epithelial cells (HMEC), prostate cancer cell line (MDA-PCa-2b), and breast cancer cell lines (BT474 and MDA-MB-231) was analyzed by MeDIP-on-chip analysis. DNA obtained from each cells was immunoprecipitated by anti 5-methylcytidine antibody. IP DNA and input DNA were labeled with Cy5 and Cy3, respectively, and then analyzed by using human CpG island microarray provided by Agilent Technologies.
Experiment type
methylation profiling by array 
Contact
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-28284.idf.txt
Sample and data relationshipE-GEOD-28284.sdrf.txt
Processed data (1)E-GEOD-28284.processed.1.zip
Array designA-GEOD-9767.adf.txt
Links