E-GEOD-28223 - Transcription profiling by array of polysomal and non-polysomal RNA from Arabidopsis mutant for eif3k

Status
Released on 29 March 2011, last updated on 16 November 2015
Organism
Arabidopsis thaliana
Samples (12)
Array (1)
Protocols (9)
Description
To understand the contribution of the k subunit of eukaryotic transcription factor 3 (eif3k) to the translation of specific mRNAs, we compared the polysome loading states and overall transcript levels of wild type Arabidopsis and the eif3k T-DNA insertion mutant by Affymetrix arrays. We analyzed the polysome loading states of wild type Arabidopsis and the eif3k mutant using the Arabidopsis Affymetrix ATH1 array. Data from 3 biological replicates were collected.
Experiment type
transcription profiling by array 
Contacts
Albrecht von Arnim, Byung-Hoon Kim
Citation
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-28223.idf.txt
Sample and data relationshipE-GEOD-28223.sdrf.txt
Raw data (1)E-GEOD-28223.raw.1.zip
Processed data (1)E-GEOD-28223.processed.1.zip
Array designA-AFFY-2.adf.txt
Links