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E-GEOD-26785 - Expression data from Pseudomonas putida KT2440: Fuelling the central metabolism with aromatic compounds

Status
Released on 1 February 2014, last updated on 2 June 2014
Organism
Pseudomonas putida KT2440
Samples (100)
Array (1)
Protocols (6)
Description
We used Progenika oligonucleotide arrays to monitore the gene expression of P. putida during carbon source stimulus experiments. After ensuring steady state conditions on benzoate, the stimuli were introduced by changing the carbon source from benzoate to glucose, from glucose to fructose and from fructose to benzoate, respectively. The single stimuli were monitored over a time period from 10 to 120 minutes after changing the carbon source by three representative timepoints. Moreover, the steady state conditions were compared among each other. Supplementary file: Individual normalized signal intensity VALUES for each channel of each array are provided in the FullNormalizedMatrix.txt file.
Experiment type
transcription profiling by array 
Contacts
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-26785.idf.txt
Sample and data relationshipE-GEOD-26785.sdrf.txt
Raw data (1)E-GEOD-26785.raw.1.zip
Additional data (1)E-GEOD-26785.additional.1.zip
Array designA-GEOD-10933.adf.txt
Links